ChipScope – a new approach to optical microscopy

Feb. 20, 2020

For a half a millennium, people have tried to enhance human vision by technical means. While the human eye is capable of recognizing features over a wide range of size, it reaches its limits when peering at objects over giant distances or in the micro- and nanoworld. Researchers of the EU funded project ChipScope are now developing a completely new strategy towards optical microscopy.

To get insights into those formerly hidden worlds, the magnifying potential of curved glass surfaces – lenses – has been recognized and first described in the Middle Ages. Further optimizing this principle in a robust setup, the first optical microscope was developed by Z. Jansen in 1595. Nowadays, a wide range of scientific disciplines and industrial branches rely on the capability to resolve structures in the micrometer range and below, from biology and medicine to the modern chip industry. Accordingly, the need for highly-resolving gadgets is still unbroken, leading to ongoing innovations in this old field of research.

The conventional light microscope, still standard equipment in laboratories, underlies the fundamental laws of optics. Thus, resolution is limited by diffraction to the so called ‘Abbe limit’ – structural features smaller than a minimum of 200 nm cannot be resolved by this kind of microscope. To go further, either a fundamental change in the choice of sampling principles has to be undergone, e.g. by utilizing electrons instead of visible light. This is done in a scanning electron microscope and provides resolution down to some nanometers. Or, still based on light as a probe, refined strategies for getting around the limits of diffraction have been developed in recent decades. Those strategies are based on fluorescence, a process where tiny dyes connected to the sample are excited by light of a certain wavelength and reemit light at a higher wavelength. By the use of different lasers for activation and subsequent deactivation, the excited area of the sample can be decreased to below the diffraction limit, as conducted in the so-called STED microscopy.

However, all those technologies for going beyond the Abbe limit rely on complex setups, with bulky components and advanced laboratory infrastructure. Even a conventional light microscope, in most configurations, is not suitable as a mobile gadget to do research out in the field or in remote areas. In the Chipscope project funded by the EU, a completely new strategy towards optical microscopy is explored by a team of researchers from different European institutions. In classical optical microscopy, the analysed sample area is illuminated simultaneously, collecting the light which is scattered from each point with an area-selective detector, e.g. the human eye or the sensor of a camera. In the Chipscope idea instead, a structured light source with tiny, individually addressable elements is utilized. As depicted in figure below, the specimen is located on top of this light source, in close vicinity. Whenever single emitters are activated, the light propagation depends on the spatial structure of the sample, very similar to what is known as shadow imaging in the macroscopic world. To obtain an image, the overall amount of light which is transmitted through the sample region is sensed by a detector, activating one light element at a time and thereby scanning across the sample space. If the light elements have sizes in the nanometer regime and the sample is in close contact to them, the optical near field is of relevance and super resolution imaging may become possible with a chip-based setup.

To realize this alternative idea, a bunch of innovative technology is required. Several partners in the ChipScope project bring in expertise in the according research fields. The structured light source is realized by tiny light-emitting diodes (LEDs), which are developed at the University of Technology in Braunschweig, Germany. Due to their superior characteristics in comparison to other lighting systems, e.g. the classical light bulb or Halogen-based emitters, LEDs have conquered the market for general lighting applications in the past decades. However, to the present point, no structured LED arrays with individually addressable pixels down to the sub-µm regime are commercially available. This task belongs to the responsibility of TU Braunschweig within the frame of the ChipScope project. First LED arrays with pixel sizes down to 1 µm have already been demonstrated by the researchers, as depicted in the figure below. They are based on gallium nitride (GaN), a semiconductor material which is commonly used for blue and white LEDs. Controlled structuring of such LEDs down to the sub-µm regime is extremely challenging. It is conducted by photo- and electron beam lithography, where structures in the semiconductor are defined with high precision by optical shadow masks or focussed electron beams.

As a further component, highly sensitive light detectors are required for the microscope prototype. Here, Professor A. Dieguez’ group at the University of Barcelona has a high level of know-how and develops so called single-photon avalanche detectors (SPADs), which can detect very low light intensities down to single photons. First tests with those detectors integrated into a prototype of the ChipScope microscope have already been conducted and have shown promising results. Moreover, a way to bring specimens into close vicinity of the structured light source is vital for proper microscope operation. An established technology to realize this utilizes microfluidic channels, where a fine system of channels is structured into a polymer matrix. Using high-precision pumps, a micro-volume liquid is driven through this system and carries the specimen along to the target position. This part of the microscope assembly is contributed by the Austrian Institute of Technology AIT. Further partners in the ChipScope project comprise a team of the Medical University of Vienna, the University of Rome Tor Vergata, the Ludwig-Maximilians University in Munich and the FSRM, Switzerland.

The ChipScope project, funded in the framework of the EU’s Horizon 2020 programme, was launched in 2017 and will run until the end of 2020. Up to now, a lot of progress has already been achieved in the different subtopics involved in the project, including a prototype of the proposed microscope. The involved research groups are confident that the technology can be pushed forwards during the final period of the project and that the fundamentals of the ChipScope microscope technology will be explored as well as a more powerful prototype with higher resolution can be presented by the end of the project.

The ChipScope project is funded by the European Union’s Research Programme Horizon 2020.


EU funded project ChipScope

Project Coordinator: Professor Angel Dieguez, University of Barcelona


[email protected]

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